Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGGGAGCCCCAGCTGCAGG
(((((((((.((((.((((((&))))))..)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022089
GeneSymbolATP13A2
Binding site2007,2030
Score1.0
Seed1
Au0.338
Energy-23.7
Binding len23
Me-5.916
Phylopstem0.9523013333333332
Phylopflank2.17402695125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure