Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGATACAGCTGCCCGCTCGCAT
.((((((.(((((((((..((&))..)))))))))..))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022091
GeneSymbolASCC3
Binding site127,150
Score0.846
Seed1
Au0.265
Energy-20.3
Binding len23
Me-6.107
Phylopstem1.2677963333333333
Phylopflank0.20854649874999998
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end6
Position5UTR
2D Structure