Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGCGGCGCAGCCTGTAC
.(((((((((.((((((.(((&))).))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022092
GeneSymbolCHTF18
Binding site2954,2975
Score0.923
Seed1
Au0.397
Energy-21.6
Binding len21
Me-6.618
Phylopstem2.249396
Phylopflank2.5560231987499997
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure