Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTAATTGCAGCA
.....((((((((((.(((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022096
GeneSymbolANKEF1
Binding site3493,3509
Score0.846
Seed0
Au0.632
Energy-19.1
Binding len16
Me-13.899
Phylopstem-0.48217499999999996
Phylopflank-0.13263677499999998
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure