Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAATGGGCTGTACTCCCACAATGAGGGCTGCAGA
((((((((...(((((..((.&.)).)))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022096
GeneSymbolANKEF1
Binding site687,724
Score0.846
Seed1
Au0.515
Energy-18.2
Binding len21
Me-9.061
Phylopstem3.3531153999999996
Phylopflank3.14389208625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure