Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTAGCTGTTGTGCTGCGC
.((((((.(((((((.((((.&)))).)))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022098
GeneSymbolXPNPEP3
Binding site3095,3117
Score0.846
Seed1
Au0.471
Energy-20.9
Binding len22
Me-6.34
Phylopstem0.12904338571428572
Phylopflank-0.17990580375000004
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure