Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCCAAGTAACTGGGACTACAGGTGCACGCTGCC
..(((((((((.(((((((((&.))))................))))).)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022098
GeneSymbolXPNPEP3
Binding site3441,3484
Score0.846
Seed1
Au0.529
Energy-21.1
Binding len38
Me-8.304
Phylopstem-0.14525196000000004
Phylopflank-0.1189413249999999
Longest consecutive pairings5
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure