Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTACCGCTACAGCTGCAT
.((((((((.(((.((((((.&)))))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022104
GeneSymbolPCIF1
Binding site1656,1676
Score0.846
Seed1
Au0.471
Energy-23.4
Binding len20
Me-5.893
Phylopstem5.026086875
Phylopflank5.22018450975
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure