Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGAAAGTTACAGCCAAAGCACTGCAGA
((((((.(((((((((((...&.))))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022111
GeneSymbolCLSPN
Binding site3735,3766
Score0.923
Seed0
Au0.529
Energy-20.4
Binding len22
Me-5.481
Phylopstem0.01571568571428569
Phylopflank0.4148620146250001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure