Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTATCCAAATTTTCAGAAAAGACAGCTTCAGCTTGCAAA
(((((((((.((((((.....&.)))))).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366089
GeneSymbolPHTF2
Binding site3473,3515
Score0.846
Seed1
Au0.647
Energy-19.5
Binding len19
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end3
Position3UTR
2D Structure