Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCTGTGGGTGCCGGGTG
(((((((((.((..(.((((..&)))))..)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022114
GeneSymbolPRDM16
Binding site5841,5861
Score0.923
Seed1
Au0.412
Energy-19.7
Binding len20
Me-7.559
Phylopstem-0.2318087777777778
Phylopflank-0.4027864762500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure