Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGAGGCTCCTGCAGGA
....((((((((((((((...&)))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_022114
GeneSymbolPRDM16
Binding site5889,5907
Score0.923
Seed0
Au0.382
Energy-26.6
Binding len18
Me-9.547
Phylopstem-0.28452622941176464
Phylopflank-0.72081624875
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure