Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGACGGCAGCTGCGGG
((((((((((.(((((.....&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022114
GeneSymbolPRDM16
Binding site1761,1778
Score0.923
Seed1
Au0.294
Energy-25.4
Binding len17
Me-6.762
Phylopstem-0.26602841
Phylopflank2.1869032112499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure