Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCGCCTTCGACATCATCGCGCTGGCCGGCCGCGGCTGG
...((((((((((((...(((&.)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022121
GeneSymbolPERP
Binding site142,184
Score1.0
Seed0
Au0.324
Energy-24.6
Binding len20
Me-6.748
Phylopstem-0.07786359999999998
Phylopflank0.5610263962499998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure