Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCGTCTGTGAT
((((((..(((((((((....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022122
GeneSymbolMMP27
Binding site1185,1201
Score1.0
Seed0
Au0.574
Energy-17.6
Binding len16
Me-7.795
Phylopstem4.103170955555555
Phylopflank3.5530514500000008
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure