Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTGCAAGCTGCAT
.(((((((((((.........&))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022122
GeneSymbolMMP27
Binding site1039,1052
Score0.923
Seed1
Au0.5
Energy-17.2
Binding len13
Me-6.908
Phylopstem4.115697083333333
Phylopflank1.4317280075
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure