Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAGTCGGACCTGCGGCTGCAGA
((((((((((((((.......&.)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022123
GeneSymbolNPAS3
Binding site2029,2053
Score0.846
Seed1
Au0.338
Energy-22.5
Binding len17
Me-4.906
Phylopstem3.9610239466666664
Phylopflank3.99091842
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure