Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTCTCCTTCATCGTCAAGGCCTCCAGCAATCGCAGCTGGAC
.(.(((((((((((((.((((&.))))...))))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022124
GeneSymbolCDH23
Binding site8795,8839
Score0.846
Seed0
Au0.353
Energy-27.6
Binding len24
Me-5.351
Phylopstem5.374475384615384
Phylopflank3.1829518125000007
Longest consecutive pairings13
Position of longest consecutive pairings3
Pairings in 3prime end7
PositionCDS
2D Structure