Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATGCTGGGGAGGCTGCATTAGTGCTCTTGAAAAGGGGCTGCCAGGTG
((((((((((((((((((..((&.))..))))))).)))...............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022128
GeneSymbolRBKS
Binding site686,735
Score0.846
Seed1
Au0.485
Energy-20.0
Binding len40
Me-3.938
Phylopstem3.1396562941176476
Phylopflank3.5079940549999993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure