Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCCAAGCAGCTGGGAC
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022132
GeneSymbolMCCC2
Binding site2456,2482
Score0.846
Seed0
Au0.426
Energy-22.0
Binding len26
Me-5.728
Phylopstem-0.01281814999999998
Phylopflank-0.12371603749999999
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure