Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCTGCAGGCCTGCAT
.(((((((((((((...(((.&))).))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022132
GeneSymbolMCCC2
Binding site2782,2802
Score1.0
Seed1
Au0.471
Energy-19.6
Binding len20
Me-4.762
Phylopstem-0.0040277466666666685
Phylopflank-0.25456118325
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure