Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGAAATGCAGCTGCCAGGTG
((((((((.....((((..(((&)))..))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001366110
GeneSymbolPAX4
Binding site1104,1124
Score0.846
Seed1
Au0.426
Energy-15.7
Binding len20
Me-13.697
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure