Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTATTCGTGTGACCAGGA
.((((((((((...((((((((&))))))))..))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022137
GeneSymbolSMOC1
Binding site930,952
Score0.872
Seed1
Au0.485
Energy-20.7
Binding len22
Me-9.286
Phylopstem2.654177272727273
Phylopflank4.25661172425
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure