Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGCTGTCTCAGTGCCAGGG
.((((((((....((.((((..&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022137
GeneSymbolSMOC1
Binding site2632,2653
Score0.846
Seed1
Au0.382
Energy-17.2
Binding len16
Me-12.73
Phylopstem-1.260535
Phylopflank-0.336830506125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure