Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGCTGCTGCTGCTGCT
..(((((.(((((.((.((((&))))..)).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022139
GeneSymbolGFRA4
Binding site17,38
Score0.846
Seed0
Au0.299
Energy-23.3
Binding len21
Me-8.127
Phylopstem0.54312108
Phylopflank0.458296539375
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure