Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCGCTGGAGCTGCT
..((((((.(((.(((.(((.&))).)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022141
GeneSymbolPARVG
Binding site1276,1294
Score0.846
Seed1
Au0.368
Energy-21.8
Binding len18
Me-7.303
Phylopstem2.0175818833333334
Phylopflank1.51283138875
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure