Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTACTTCCCGGCTGCC
..(((((((.((..(((.(((&))).)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022141
GeneSymbolPARVG
Binding site2909,2928
Score0.846
Seed1
Au0.397
Energy-21.9
Binding len19
Me-8.345
Phylopstem-1.2308662214285715
Phylopflank-0.7440391375000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure