Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTCATCGACTACGGGCAGCTCAGCGCGCCGCAGCTGCAC
.(((((((((((((((..(((&.)))..))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022146
GeneSymbolNPFFR1
Binding site1197,1240
Score1.0
Seed1
Au0.324
Energy-27.6
Binding len23
Me-3.793
Phylopstem-0.5890210437499999
Phylopflank-0.14795483125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure