Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGCCTGTCCCTAAAGCTGTGGCCTGTAAT
((((((((((((((...(((.&.)))..))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022150
GeneSymbolNPVF
Binding site641,676
Score1.0
Seed1
Au0.515
Energy-18.6
Binding len22
Me-4.906
Phylopstem0.33499528
Phylopflank0.7937450825000002
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure