Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCAACGGTGGTTGCAT
.(((((((((.((((......&.)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022157
GeneSymbolRRAGC
Binding site1923,1941
Score1.0
Seed1
Au0.529
Energy-18.5
Binding len16
Me-6.851
Phylopstem4.663121111111112
Phylopflank6.049917124999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure