Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGAAGATCCCCAAGGCTCCGGGCTTCGACCAGCGGCTGCT
..(((((((((((((.(((.(&.).)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022158
GeneSymbolFN3K
Binding site812,855
Score1.0
Seed1
Au0.412
Energy-24.7
Binding len21
Me-5.19
Phylopstem4.1120345714285715
Phylopflank3.1980887325000005
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure