Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGAGCGGCTCCAGCGCAGCGGGGAGCTGCCGCCGCAGAAGCTGCAGG
(((((((((((((.(((....&.))).))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022165
GeneSymbolLIN7B
Binding site94,144
Score0.846
Seed1
Au0.294
Energy-22.7
Binding len22
Me-4.794
Phylopstem3.6622036312499997
Phylopflank2.881600333375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure