Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGGTCTCTGGAAACCTATTACAGCCTGCAGCTGTGAG
(((((((((((((((((((((&.))))..))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022166
GeneSymbolXYLT1
Binding site5981,6022
Score0.846
Seed1
Au0.456
Energy-29.1
Binding len26
Me-3.938
Phylopstem0.014991937500000017
Phylopflank-0.16262706500000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure