Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACTGGAACCGCAAGCTGGGCTGCAAG
((((((((((((((.((.(((&)))...)).)))))))......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022167
GeneSymbolXYLT2
Binding site1389,1419
Score0.846
Seed1
Au0.412
Energy-23.3
Binding len30
Me-4.673
Phylopstem6.5168681500000005
Phylopflank5.45318915
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure