Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAAAAACTGCAGTGTGCT
..((((((((((((((((((.&)))))))...)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022168
GeneSymbolIFIH1
Binding site3092,3115
Score0.923
Seed1
Au0.603
Energy-20.8
Binding len23
Me-4.957
Phylopstem2.29043755
Phylopflank1.0356869687499999
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure