Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTCCAGCTGCGGCCTGCAC
.((((((((((((((...(((&)))....)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022172
GeneSymbolPC
Binding site1590,1613
Score0.846
Seed1
Au0.397
Energy-22.7
Binding len23
Me-4.026
Phylopstem2.3391076
Phylopflank2.342000561249999
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure