Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAAGCAACTGTACTGTAT
.(((((.(((((((((..((.&))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022173
GeneSymbolTIA1
Binding site828,847
Score0.923
Seed0
Au0.574
Energy-19.3
Binding len19
Me-5.337
Phylopstem1.1195814444444445
Phylopflank1.8067939962500006
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure