Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCACGCGGACCCCGAAGTCCGCAACCCGGGGATGGGCCCGCGGCTGCGAG
((((((((((((.(.((....&.)).).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022334
GeneSymbolITGB1BP1
Binding site106,156
Score0.923
Seed1
Au0.338
Energy-23.3
Binding len19
Me-5.962
Phylopstem0.02412469999999999
Phylopflank0.3769175899999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure