Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAGCCACATGCTGCAT
.((((((((.(((((..((((&))))..))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022336
GeneSymbolEDAR
Binding site1599,1621
Score0.846
Seed1
Au0.368
Energy-24.6
Binding len22
Me-5.269
Phylopstem-0.6767678777777778
Phylopflank-0.42201116250000004
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure