Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCCAGCTGCTCTGGCTGTG
..((((((((((((((((...&)))).))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022337
GeneSymbolRAB38
Binding site663,684
Score0.846
Seed1
Au0.471
Energy-17.7
Binding len21
Me-4.957
Phylopstem0.5236078500000001
Phylopflank0.18533023342499996
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure