Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGCAAAGATTCGAGCAATAGAAAAGTCTGTGGTGCCTTGGGTC
((((((((((((.(((((((((&))))))))).......................)))).))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022340
GeneSymbolRBSN
Binding site1031,1079
Score0.923
Seed1
Au0.515
Energy-16.5
Binding len48
Me-5.227
Phylopstem0.4243517066666668
Phylopflank0.08186758374999997
Longest consecutive pairings9
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure