Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCGGGAACAGCTGCAGA
((((((((((.(((((.((((&))))))))).)...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022340
GeneSymbolRBSN
Binding site2160,2184
Score0.846
Seed1
Au0.412
Energy-24.3
Binding len24
Me-6.762
Phylopstem0.014378461538461541
Phylopflank-0.20705212500000003
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure