Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAAGCAATTTGCGGCTGCAGA
((((((((((((((((..((.&))..)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022340
GeneSymbolRBSN
Binding site1658,1680
Score1.0
Seed1
Au0.529
Energy-24.1
Binding len22
Me-3.938
Phylopstem0.2816604411764706
Phylopflank0.1983553487500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure