Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACCAACCGCACCTTTGTGAC
((((((.((((((((..((((&))))...))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022342
GeneSymbolKIF9
Binding site1433,1458
Score1.0
Seed0
Au0.485
Energy-20.0
Binding len25
Me-5.714
Phylopstem1.341575125
Phylopflank1.7971168349999997
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure