Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTGTGCCTGCTCATAAACAAGCTTTTGGGAAGTATGCCAGA
..(((((((((...........&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_022346
GeneSymbolNCAPG
Binding site448,491
Score0.923
Seed1
Au0.588
Energy-16.5
Binding len11
Me-11.418
Phylopstem4.3565978888888885
Phylopflank4.607671574999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure