Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTAGGACTGGAGCTGCAGA
((((((((.(((((.((((..&)))).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022346
GeneSymbolNCAPG
Binding site2217,2237
Score0.846
Seed1
Au0.5
Energy-26.7
Binding len20
Me-5.729
Phylopstem3.4143638749999994
Phylopflank3.63323328875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure