Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTATAACCCAGCTTTAGCAT
.((((((((.(((((((((((&))))))))))))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022350
GeneSymbolERAP2
Binding site4266,4289
Score1.0
Seed1
Au0.618
Energy-20.2
Binding len23
Me-5.036
Phylopstem0.1863234727272727
Phylopflank0.3241302675000001
Longest consecutive pairings16
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure