Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCGGCCGCGC
.(((.(((((((((((.....&))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022351
GeneSymbolNECAB1
Binding site33,49
Score0.846
Seed0
Au0.221
Energy-22.1
Binding len16
Me-7.912
Phylopstem0.4928997181818182
Phylopflank-0.09512412809782611
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end3
Position5UTR
2D Structure