Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGAGCTGGGCAGCAGCGGCCGAGGAGGAAGAAGCAGCTGCGGC
((((((((((((((((.....&.))))))............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022359
GeneSymbolPDE4DIP
Binding site239,286
Score0.846
Seed1
Au0.382
Energy-22.0
Binding len30
Me-3.938
Phylopstem0.5366798
Phylopflank0.30480016624999995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure