Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGCCCGGCTCAT
.((.(((((.(((((((((((&)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_022362
GeneSymbolMMS19
Binding site2493,2512
Score1.0
Seed0
Au0.426
Energy-25.7
Binding len19
Me-8.068
Phylopstem2.787437563636364
Phylopflank4.573582340000001
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure